MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1123c · 44 genes shown · anchor ephC · open gene page → · ← back to 1 hop

Evidence: Min score 0
bpoB (requalified) — peroxidase BpoB bpoB ephC (requalified) — epoxide hydrolase EphC ephC Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC Rv0216 (family_assigned) — MaoC family dehydratase Rv0216 Rv2627c (family_assigned) — alpha/beta hydrolase Rv2627c pks1 (requalified) — polyketide synthase pks1 Rv0144 (family_assigned) — transcriptional regulator Rv0144 pks7 (requalified) — type I polyketide synthase pks7 Rv2296 (requalified) — haloalkane dehalogenase Rv2296 pks13 (requalified) — polyketide synthase Pks13 pks13 fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB papA1 (requalified) — acyltransferase PapA1 papA1 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB fadE3 (family_assigned) — Probable acyl-CoA dehydrogenase FadE3 fadE3 icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 echA4 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA4 fadB (requalified) — fatty oxidation protein FadB fadB echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 pepA (family_assigned) — S1C family serine protease pepA tgs1 (requalified) — diacylglycerol O-acyltransferase tgs1 Rv1733c (family_assigned) — hypothetical protein Rv1733c TB31.7 (requalified) — universal stress protein TB31.7 TB31.7 acg (family_assigned) — FMN-binding protein Acg acg narK2 (requalified) — nitrate transporter NarK narK2 hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 pks15 (requalified) — polyketide synthase pks15 mbtC (requalified) — polyketide synthetase MbtC mbtC Rv0146 (requalified) — class I SAM-dependent methyltransferase Rv0146 Rv0145 (requalified) — class I SAM-dependent methyltransferase Rv0145 Rv0143c (requalified) — chloride channel protein Rv0143c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 pks8 (requalified) — polyketide synthase pks8 pks9 (requalified) — type I polyketide synthase pks9 pks17 (requalified) — polyketide synthase pks17

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.