MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1116 · 33 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1116 (dark) — hypothetical protein Rv1116 Rv1115 (family_assigned) — hypothetical protein Rv1115 mazF1 (requalified) — toxin MazF1 mazF1 egtE (requalified) — ergothioneine biosynthesis PLP-dependent enzyme Eg egtE PE22 (family_assigned) — PE family protein PE22 PE22 lsr2 (requalified) — histone-like nucleoid-structuring protein Lsr2 lsr2 vapB32 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB32 vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv0987 (family_assigned) — FtsX-like permease family protein Rv0987 mazE9 (requalified) — antitoxin MazE9 mazE9 mazE7 (requalified) — antitoxin MazE7 mazE7 mazE1 (requalified) — antitoxin MazE1 mazE1 mazF7 (requalified) — mRNA interferase MazF7 mazF7 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 mazE6 (requalified) — antitoxin MazE6 mazE6 egtC (requalified) — ergothioneine biosynthesis protein EgtC egtC egtD (requalified) — L-histidine N(alpha)-methyltransferase egtD Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 gshA (requalified) — ergothioneine biosynthesis glutamate--cysteine lig gshA etgB (requalified) — ergothioneine biosynthesis protein EgtB etgB spmT (requalified) — sphingomyelinase spmT PPE36 (family_assigned) — PPE family protein PPE36 PPE36 PPE29 (family_assigned) — PPE family protein PPE29 PPE29 oplA (family_assigned) — hydantoinase B/oxoprolinase family protein oplA Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 panD (requalified) — aspartate 1-decarboxylase panD panC (requalified) — pantoate--beta-alanine ligase panC Rv3600c (requalified) — type III pantothenate kinase Rv3600c Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.