MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1114 · 46 genes shown · anchor vapB32 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 vapB32 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB32 ychF (requalified) — redox-regulated ATPase YchF ychF Rv1115 (family_assigned) — hypothetical protein Rv1115 Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 vapC44 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC44 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 vapB41 (requalified) — antitoxin VapB41 vapB41 vapB14 (requalified) — antitoxin vapB14 Rv0366c (family_assigned) — zeta toxin family protein Rv0366c lepA (requalified) — translation elongation factor 4 lepA prfA (requalified) — peptide chain release factor 1 prfA pth (requalified) — aminoacyl-tRNA hydrolase pth guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv1116 (dark) — hypothetical protein Rv1116 Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv0987 (family_assigned) — FtsX-like permease family protein Rv0987 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3909 (dark) — hypothetical protein Rv3909 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv3212 (family_assigned) — hypothetical protein Rv3212 vapC2 (family_assigned) — PIN domain nuclease vapC2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC15 (family_assigned) — PIN domain nuclease vapC15 vapB38 (requalified) — antitoxin vapB38 Rv2492 (requalified) — hypothetical protein Rv2492 Rv2491 (family_assigned) — TIGR00725 family protein Rv2491 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 vapB39 (requalified) — antitoxin VapB39 vapB39 Rv2531c (requalified) — amino acid decarboxylase Rv2531c pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ nusB (requalified) — transcription antitermination factor NusB nusB Rv2532c (requalified) — antitermination protein NusB Rv2532c efp (requalified) — elongation factor P efp vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 Rv3322c (requalified) — methyltransferase Rv3322c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.