MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1112 · 46 genes shown · anchor lepA · open gene page → · ← back to 1 hop

Evidence: Min score 0
ychF (requalified) — redox-regulated ATPase YchF ychF lepA (requalified) — translation elongation factor 4 lepA prfA (requalified) — peptide chain release factor 1 prfA pth (requalified) — aminoacyl-tRNA hydrolase pth Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT argS (requalified) — arginine--tRNA ligase argS fusA1 (requalified) — elongation factor G fusA1 thrS (requalified) — threonine--tRNA ligase thrS rpsG (requalified) — 30S ribosomal protein S7 rpsG vapB32 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB32 vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 rplS (requalified) — 50S ribosomal protein L19 rplS rplM (requalified) — 50S ribosomal protein L13 rplM rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsP (requalified) — 30S ribosomal protein S16 rpsP rplQ (requalified) — 50S ribosomal protein L17 rplQ rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK rplT (requalified) — 50S ribosomal protein L20 rplT rpmE (requalified) — 50S ribosomal protein L31 rpmE rpmA (requalified) — 50S ribosomal protein L27 rpmA mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3909 (dark) — hypothetical protein Rv3909 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv3212 (family_assigned) — hypothetical protein Rv3212 guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 apt (requalified) — adenine phosphoribosyltransferase apt rplK (requalified) — 50S ribosomal protein L11 rplK pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO gltS (requalified) — glutamate--tRNA ligase gltS metS (requalified) — methionine--tRNA ligase metS proS (requalified) — proline--tRNA ligase proS rpsL (requalified) — 30S ribosomal protein S12 rpsL

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.