MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1111c · 46 genes shown · anchor ychF · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c ychF (requalified) — redox-regulated ATPase YchF ychF Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3909 (dark) — hypothetical protein Rv3909 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv1083 (dark) — hypothetical protein Rv1083 Rv2164c (family_assigned) — hypothetical protein Rv2164c lepA (requalified) — translation elongation factor 4 lepA prfA (requalified) — peptide chain release factor 1 prfA pth (requalified) — aminoacyl-tRNA hydrolase pth guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 serS (requalified) — serine--tRNA ligase serS Rv2843 (family_assigned) — hypothetical protein Rv2843 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB rsdA (requalified) — anti-sigma D factor RsdA rsdA sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv2186c (requalified) — polyketide cyclase / dehydrase and lipid transport Rv2186c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.