MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1106c · 46 genes shown · anchor xseB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c cyp142 (requalified) — steroid C26-monooxygenase Cyp142 cyp142 cyp125 (requalified) — steroid C26-monooxygenase cyp125 choD (requalified) — cholesterol oxidase choD xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA Rv1109c (requalified) — lipid droplet-associated protein Rv1109c rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 pks13 (requalified) — polyketide synthase Pks13 pks13 Rv2776c (requalified) — oxidoreductase Rv2776c mbtE (requalified) — peptide synthetase mbtE fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 guaB2 (requalified) — IMP dehydrogenase guaB2 qcrC (requalified) — cytochrome c qcrC Rv2267c (requalified) — sulfotransferase Rv2267c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 hemC (requalified) — hydroxymethylbilane synthase hemC rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD nusG (requalified) — transcription termination/antitermination protein nusG Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 rpsH (requalified) — 30S ribosomal protein S8 rpsH rplS (requalified) — 50S ribosomal protein L19 rplS rplB (requalified) — 50S ribosomal protein L2 rplB rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplP (requalified) — 50S ribosomal protein L16 rplP rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 rplT (requalified) — 50S ribosomal protein L20 rplT rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rplV (requalified) — 50S ribosomal protein L22 rplV rpsK (requalified) — 30S ribosomal protein S11 rpsK rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rplM (requalified) — 50S ribosomal protein L13 rplM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.