MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1101c · 46 genes shown · anchor mmpL11 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1101c (family_assigned) — AI-2E family transporter Rv1101c Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3909 (dark) — hypothetical protein Rv3909 mmpL11 (requalified) — RND transporter MmpL11 mmpL11 Rv2264c (family_assigned) — Hsp70 family protein Rv2264c aac (requalified) — aminoglycoside 2'-N-acetyltransferase aac ptrp (family_assigned) — hypothetical protein ptrp Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 mce4F (family_assigned) — virulence factor Mce family protein mce4F Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1648 (family_assigned) — rhomboid-like protein Rv1648 mazF3 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF3 Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 serS (requalified) — serine--tRNA ligase serS Rv2843 (family_assigned) — hypothetical protein Rv2843 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c Rv0201c (family_assigned) — XRE family transcriptional regulator Rv0201c htpG (requalified) — molecular chaperone HtpG htpG grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 groEL1 (requalified) — chaperonin GroEL groEL1 groEL2 (requalified) — chaperonin GroEL groEL2 Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv1775 (family_assigned) — hypothetical protein Rv1775 ftsQ (requalified) — cell division protein FtsQ ftsQ eno (requalified) — phosphopyruvate hydratase eno Rv1025 (dark) — hypothetical protein Rv1025 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 mfd (requalified) — transcription-repair coupling factor mfd lpqU (requalified) — lytic murein transglycosylase lpqU mce4D (family_assigned) — virulence factor Mce family protein mce4D mce4C (family_assigned) — virulence factor Mce family protein mce4C lprN (family_assigned) — Mce family lipoprotein LprN lprN mce4B (family_assigned) — virulence factor Mce family protein mce4B yrbE4B (family_assigned) — ABC transporter permease yrbE4B

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.