MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1095 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
phoH2 (family_assigned) — PhoH family protein phoH2 rne (family_assigned) — Rne/Rng family ribonuclease rne Rv1096 (family_assigned) — polysaccharide deacetylase family protein Rv1096 desA2 (requalified) — acyl-ACP desaturase desA2 Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 napA (requalified) — DUF3263 domain-containing protein napA dusB (requalified) — tRNA dihydrouridine synthase DusB dusB lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE desA1 (requalified) — acyl-ACP desaturase DesA desA1 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI eno (requalified) — phosphopyruvate hydratase eno rapZ (requalified) — RNase adapter RapZ rapZ rphA (requalified) — ribonuclease PH rphA rplU (requalified) — 50S ribosomal protein L21 rplU mftF (requalified) — mycofactocin biosynthesis glycosyltransferase MftF mftF aftD (family_assigned) — DUF3367 domain-containing protein aftD aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c Rv3230c (requalified) — NADPH oxidoreductase Rv3230c desA3 (requalified) — stearoyl-CoA 9-desaturase desA3 fas (requalified) — fatty acid synthase fas nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI fdxC (family_assigned) — ferredoxin family protein fdxC Rv0514 (dark) — hypothetical protein Rv0514 hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hemC (requalified) — hydroxymethylbilane synthase hemC hemB (requalified) — porphobilinogen synthase hemB hemA (requalified) — glutamyl-tRNA reductase hemA ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA ccsA (requalified) — c-type cytochrome biogenesis protein CcsB ccsA ccdA (requalified) — cytochrome C-type biogenesis protein CcdA ccdA Rv0526 (requalified) — thioredoxin Rv0526 Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 sodC (family_assigned) — superoxide dismutase family protein sodC Rv0434 (family_assigned) — LON peptidase substrate-binding domain-containing Rv0434 def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c Rv3282 (requalified) — nucleoside triphosphate pyrophosphatase Rv3282

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.