MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1094 · 46 genes shown · anchor glyA1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
desA2 (requalified) — acyl-ACP desaturase desA2 desA1 (requalified) — acyl-ACP desaturase DesA desA1 Rv3230c (requalified) — NADPH oxidoreductase Rv3230c desA3 (requalified) — stearoyl-CoA 9-desaturase desA3 fas (requalified) — fatty acid synthase fas nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI fdxC (family_assigned) — ferredoxin family protein fdxC dusB (requalified) — tRNA dihydrouridine synthase DusB dusB nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ glyA1 (requalified) — serine hydroxymethyltransferase glyA1 phoH2 (family_assigned) — PhoH family protein phoH2 Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 iscS (family_assigned) — cysteine desulfurase family protein iscS fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH Rv3231c (family_assigned) — hypothetical protein Rv3231c tgs3 (requalified) — diacyglycerol O-acyltransferase tgs3 htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 nrdH (requalified) — redoxin NrdH nrdH nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 Rv3050c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3050c nrdB (requalified) — R2-like ligand-binding oxidase nrdB dapC (requalified) — succinyldiaminopimelate transaminase dapC Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv3282 (requalified) — nucleoside triphosphate pyrophosphatase Rv3282 Rv0825c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0825c gltS (requalified) — glutamate--tRNA ligase gltS Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB gcvT (requalified) — aminomethyltransferase gcvT purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD purN (requalified) — phosphoribosylglycinamide formyltransferase purN gcvH (requalified) — glycine cleavage system protein GcvH gcvH rne (family_assigned) — Rne/Rng family ribonuclease rne

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.