MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1093 · 40 genes shown · anchor gcvT · open gene page → · ← back to 1 hop

Evidence: Min score 0
glyA1 (requalified) — serine hydroxymethyltransferase glyA1 gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB gcvT (requalified) — aminomethyltransferase gcvT purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD purN (requalified) — phosphoribosylglycinamide formyltransferase purN gcvH (requalified) — glycine cleavage system protein GcvH gcvH sdaA (requalified) — L-serine ammonia-lyase sdaA cbs (requalified) — cystathionine beta-synthase cbs thyX (requalified) — FAD-dependent thymidylate synthase thyX serB2 (requalified) — phosphoserine phosphatase SerB serB2 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC purU (requalified) — formyltetrahydrofolate deformylase purU glyA2 (requalified) — serine hydroxymethyltransferase glyA2 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c purD (requalified) — phosphoribosylamine--glycine ligase purD purB (requalified) — adenylosuccinate lyase purB purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT purA (requalified) — adenylosuccinate synthase purA fmt (requalified) — methionyl-tRNA formyltransferase fmt purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv0787A (family_assigned) — hypothetical protein Rv0787A ilvA (requalified) — threonine ammonia-lyase ilvA trpA (family_assigned) — tryptophan synthase subunit alpha trpA metB (requalified) — cystathionine gamma-synthase metB metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ cysE (requalified) — serine O-acetyltransferase cysE sahH (requalified) — adenosylhomocysteinase sahH dfrA (requalified) — dihydrofolate reductase dfrA thyA (requalified) — thymidylate synthase ThyA thyA tmk (requalified) — dTMP kinase tmk serC (requalified) — phosphoserine transaminase serC trpB (family_assigned) — tryptophan synthase subunit beta trpB dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA metH (requalified) — methionine synthase metH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.