MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1087A · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1087A (family_assigned) — Conserved hypothetical protein Rv1087A cdsA (requalified) — phosphatidate cytidylyltransferase cdsA proS (requalified) — proline--tRNA ligase proS dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr Rv2256c (dark) — hypothetical protein Rv2256c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 nusA (requalified) — transcription termination factor NusA nusA rip (requalified) — zinc metalloprotease Rip rip rimP (requalified) — ribosome maturation factor RimP rimP Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c frr (requalified) — ribosome recycling factor frr Rv0500A (family_assigned) — DNA-binding protein Rv0500A rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c Rv2252 (requalified) — diacylglycerol kinase Rv2252 pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 ileS (requalified) — isoleucine--tRNA ligase ileS gltS (requalified) — glutamate--tRNA ligase gltS argS (requalified) — arginine--tRNA ligase argS metS (requalified) — methionine--tRNA ligase metS leuS (requalified) — leucine--tRNA ligase leuS lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD dxs1 (requalified) — 1-deoxy-D-xylulose 5-phosphate synthase dxs1 dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c Rv2681 (requalified) — ribonuclease D Rv2681 hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ echA15 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA15 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rplK (requalified) — 50S ribosomal protein L11 rplK rpsG (requalified) — 30S ribosomal protein S7 rpsG mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c rpsL (requalified) — 30S ribosomal protein S12 rpsL Rv2840c (family_assigned) — hypothetical protein Rv2840c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.