MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1085c · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1085c (family_assigned) — hemolysin III family protein Rv1085c Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 glpK (requalified) — glycerol kinase GlpK glpK Rv1770 (family_assigned) — hypothetical protein Rv1770 lpqL (family_assigned) — M28 family metallopeptidase lpqL eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 Rv0435c (family_assigned) — AAA family ATPase Rv0435c rhlE (requalified) — DEAD/DEAH box helicase rhlE dinG (requalified) — ATP-dependent helicase DinG dinG kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsB (family_assigned) — polyprenyl synthetase family protein idsB Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c idi (requalified) — isopentenyl-diphosphate Delta-isomerase idi lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 mpa (requalified) — proteasome ATPase mpa mec (requalified) — CysO-cysteine peptidase mec glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 prcB (family_assigned) — proteasome subunit beta prcB prcA (family_assigned) — proteasome subunit alpha prcA Rv1769 (requalified) — amino acid deaminase/aldolase Rv1769 Rv1771 (requalified) — L-gulono-1%2C4-lactone dehydrogenase Rv1771 lipT (requalified) — carboxylesterase LipT lipT lpqM (requalified) — neutral zinc metallopeptidase lpqM thiS (requalified) — sulfur carrier protein ThiS thiS otsB2 (requalified) — trehalose-phosphatase otsB2 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 PE5 (family_assigned) — PE family protein PE5 PE5 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 espH (requalified) — type VII secretion system ESX-1 associated protein espH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.