MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1083 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1083 (dark) — hypothetical protein Rv1083 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c mca (requalified) — mycothiol conjugate amidase Mca mca Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv0358 (requalified) — peptidase M50 Rv0358 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c rseA (requalified) — anti-sigma E factor RseA rseA Rv3217c (dark) — hypothetical protein Rv3217c Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv3311 (family_assigned) — primosomal protein Rv3311 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2732c (family_assigned) — hypothetical protein Rv2732c lppL (family_assigned) — hypothetical protein lppL Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c mshD (requalified) — mycothiol synthase mshD Rv0360c (family_assigned) — hypothetical protein Rv0360c Rv0519c (family_assigned) — membrane protein Rv0519c Rv1987 (family_assigned) — cellulose-binding protein Rv1987 celA1 (requalified) — cellulase CelA celA1 xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0359 (family_assigned) — site-2 protease family protein Rv0359 purA (requalified) — adenylosuccinate synthase purA Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 folC (requalified) — bifunctional tetrahydrofolate synthase/dihydrofola folC valS (requalified) — valine--tRNA ligase valS Rv0863 (family_assigned) — hypothetical protein Rv0863 tatB (requalified) — Sec-independent protein translocase protein TatB tatB sigE (requalified) — RNA polymerase sigma factor SigE sigE htrA (requalified) — serine protease HtrA htrA Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv3212 (family_assigned) — hypothetical protein Rv3212 moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 sapM (requalified) — phosphatidylinositol-3-phosphatase sapM menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.