MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1068c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS20 (family_assigned) — PE-PGRS family protein PE_PGRS20 PE_PGRS20 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD rpfA (requalified) — resuscitation-promoting factor protein RpfA rpfA gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC8 (family_assigned) — PIN domain-containing protein vapC8 PPE51 (family_assigned) — PPE family protein PPE51 PPE51 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 Rv2390c (family_assigned) — hypothetical protein Rv2390c Rv1954A (dark) — Hypothetical protein Rv1954A hemN (requalified) — oxygen-independent coproporphyrinogen III oxidase hemN Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c Rv2286c (family_assigned) — DsbA family protein Rv2286c PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv0316 (family_assigned) — muconolactone Delta-isomerase family protein Rv0316 Rv3737 (family_assigned) — threonine/serine exporter family protein Rv3737 Rv1230c (family_assigned) — lytic transglycosylase domain-containing protein Rv1230c pgk (requalified) — phosphoglycerate kinase pgk tpi (requalified) — triose-phosphate isomerase tpi fba (requalified) — class II fructose-bisphosphate aldolase fba eno (requalified) — phosphopyruvate hydratase eno pgi (requalified) — glucose-6-phosphate isomerase pgi tkt (requalified) — transketolase tkt vapB12 (requalified) — antitoxin vapB12 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB47 (requalified) — antitoxin VapB47 vapB47 mazE9 (requalified) — antitoxin MazE9 mazE9 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB8 (requalified) — antitoxin VapB8 vapB8 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD PPE50 (family_assigned) — PPE family protein PPE50 PPE50 hisN (requalified) — histidinol-phosphatase hisN Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 ephD (family_assigned) — SDR family oxidoreductase ephD cinA (requalified) — competence/damage-inducible protein A cinA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.