MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1057 · 46 genes shown · anchor fadD14 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1057 (family_assigned) — YncE family protein Rv1057 fadD14 (requalified) — long-chain fatty acid--CoA ligase fadD14 PE_PGRS17 (family_assigned) — PE-PGRS family protein PE_PGRS17 PE_PGRS17 PE_PGRS18 (family_assigned) — PE-PGRS family protein PE_PGRS18 PE_PGRS18 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB Rv1061 (requalified) — class II glutamine amidotransferase Rv1061 Rv1062 (family_assigned) — patatin-like phospholipase family protein Rv1062 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv2574 (family_assigned) — SRPBCC family protein Rv2574 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c qcrC (requalified) — cytochrome c qcrC Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv1059 (requalified) — dihydrodipicolinate reductase Rv1059 Rv1060 (family_assigned) — SRPBCC family protein Rv1060 rplF (requalified) — 50S ribosomal protein L6 rplF Rv1157c (dark) — hypothetical protein Rv1157c Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv2209 (requalified) — MFS transporter Rv2209 Rv0318c (family_assigned) — integral membrane protein Rv0318c PPE24 (family_assigned) — PPE family protein PPE24 PPE24 mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA pks13 (requalified) — polyketide synthase Pks13 pks13 mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH mbtE (requalified) — peptide synthetase mbtE mbtC (requalified) — polyketide synthetase MbtC mbtC pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 Rv0232 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0232 Rv0941c (family_assigned) — STAS domain-containing protein Rv0941c Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c rsmA (requalified) — anti-sigma-M factor RsmA rsmA pimE (requalified) — mannosyltransferase pimE Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 Rv2575 (requalified) — neutral zinc metallopeptidase Rv2575 mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv2632c (family_assigned) — DUF1876 domain-containing protein Rv2632c Rv3896c (requalified) — transglycosylase Rv3896c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.