MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1056 · 39 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1056 (family_assigned) — DUF427 domain-containing protein Rv1056 Rv1670 (family_assigned) — DUF427 domain-containing protein Rv1670 phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv1057 (family_assigned) — YncE family protein Rv1057 frr (requalified) — ribosome recycling factor frr ephA (requalified) — epoxide hydrolase EphA ephA ephG (requalified) — epoxide hydrolase ephG Rv1671 (dark) — hypothetical protein Rv1671 Rv1669 (dark) — hypothetical protein Rv1669 egtD (requalified) — L-histidine N(alpha)-methyltransferase egtD idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 idsB (family_assigned) — polyprenyl synthetase family protein idsB fadD14 (requalified) — long-chain fatty acid--CoA ligase fadD14 PE_PGRS17 (family_assigned) — PE-PGRS family protein PE_PGRS17 PE_PGRS17 PE_PGRS18 (family_assigned) — PE-PGRS family protein PE_PGRS18 PE_PGRS18 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB Rv1061 (requalified) — class II glutamine amidotransferase Rv1061 Rv1062 (family_assigned) — patatin-like phospholipase family protein Rv1062 rpsB (requalified) — 30S ribosomal protein S2 rpsB rplM (requalified) — 50S ribosomal protein L13 rplM rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsO (requalified) — 30S ribosomal protein S15 rpsO rplP (requalified) — 50S ribosomal protein L16 rplP Rv3618 (requalified) — LLM class flavin-dependent oxidoreductase Rv3618 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC Rv2739c (requalified) — glycosyltransferase Rv2739c Rv2738c (family_assigned) — DUF3046 domain-containing protein Rv2738c Rv3169 (family_assigned) — hypothetical protein Rv3169 Rv1683 (requalified) — acyl-CoA synthetase Rv1683 PE_PGRS47 (family_assigned) — PE-PGRS family protein PE_PGRS47 PE_PGRS47

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.