MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1053c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1053c (dark) — Hypothetical protein Rv1053c Rv2303c (family_assigned) — amidohydrolase family protein Rv2303c Rv1907c (dark) — hypothetical protein Rv1907c Rv1841c (family_assigned) — hemolysin family protein Rv1841c mprB (requalified) — two-component system sensor histidine kinase MprB mprB ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA Rv0421c (family_assigned) — alpha/beta family hydrolase Rv0421c Rv2923c (family_assigned) — OsmC family protein Rv2923c cut5b (family_assigned) — Probable cutinase [second part] Cut5b cut5b Rv1877 (family_assigned) — MDR family MFS transporter Rv1877 arfA (family_assigned) — peptidoglycan-binding protein ArfA arfA Rv2304c (dark) — hypothetical protein Rv2304c Rv0187 (requalified) — O-methyltransferase Rv0187 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 katG (requalified) — catalase/peroxidase HPI katG Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c furA (family_assigned) — Fur family transcriptional regulator furA Rv0093c (family_assigned) — membrane protein Rv0093c Rv0034 (family_assigned) — nuclear transport factor 2 family protein Rv0034 Rv2209 (requalified) — MFS transporter Rv2209 Rv1842c (family_assigned) — hemolysin family protein Rv1842c guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 blaR (family_assigned) — M56 family metallopeptidase blaR blaI (requalified) — transcriptional repressor BlaI blaI glcB (requalified) — malate synthase G glcB mprA (requalified) — two-component system response regulator MprA mprA pepD (requalified) — serine protease PepD pepD prrA (requalified) — two-component system response regulator PrrA prrA tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA trcR (requalified) — two-component system response regulator TrcR trcR tcrX (requalified) — two-component system response regulator TcrX tcrX ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC Rv2600 (family_assigned) — integral membrane protein Rv2600 vapC40 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC40 vapB40 (family_assigned) — AbrB/MazE/SpoVT family DNA-binding domain-containi vapB40 Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c thiD (requalified) — hydroxymethylpyrimidine/phosphomethylpyrimidine ki thiD thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC Rv3693 (family_assigned) — DUF58 domain-containing protein Rv3693 Rv0420c (requalified) — transmembrane protein Rv0420c Rv0424c (dark) — hypothetical protein Rv0424c Rv2828A (dark) — hypothetical protein Rv2828A acyP (requalified) — acylphosphatase acyP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.