MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1048c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1048c (dark) — hypothetical protein Rv1048c Rv1049 (requalified) — oxidation-sensing regulator MosR Rv1049 mrr (requalified) — restriction endonuclease mrr Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv0326 (family_assigned) — hypothetical protein Rv0326 cyp135A1 (requalified) — cytochrome P450 cyp135A1 Rv0213c (requalified) — methyltransferase Rv0213c Rv1833c (requalified) — haloalkane dehalogenase Rv1833c Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv0325 (family_assigned) — hypothetical protein Rv0325 Rv1767 (family_assigned) — carboxymuconolactone decarboxylase family protein Rv1767 Rv1829 (family_assigned) — hypothetical protein Rv1829 Rv3365c (requalified) — sensor histidine kinase Rv3365c Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv1050 (family_assigned) — SDR family oxidoreductase Rv1050 sigI (requalified) — RNA polymerase sigma factor SigI sigI hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv0324 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv0324 Rv0323c (family_assigned) — PIG-L deacetylase family protein Rv0323c Rv1673c (family_assigned) — transglutaminase family protein Rv1673c Rv2735c (requalified) — three-Cys-motif partner protein TcmP Rv2735c pks13 (requalified) — polyketide synthase Pks13 pks13 mbtE (requalified) — peptide synthetase mbtE Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 fdxB (requalified) — fatty acid desaturase fdxB rplF (requalified) — 50S ribosomal protein L6 rplF kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR ppk2 (requalified) — polyphosphate kinase ppk2 fadD4 (requalified) — fatty-acid--CoA ligase FadD4 fadD4 hemN (requalified) — oxygen-independent coproporphyrinogen III oxidase hemN Rv3729 (requalified) — transferase Rv3729 Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c dhaA (requalified) — haloalkane dehalogenase dhaA Rv2296 (requalified) — haloalkane dehalogenase Rv2296 adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 adhB (requalified) — alcohol dehydrogenase B adhB adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.