MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1043c · 40 genes shown · anchor PE_PGRS28 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1043c (requalified) — serine protease Rv1043c mpa (requalified) — proteasome ATPase mpa glpK (requalified) — glycerol kinase GlpK glpK PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2209 (requalified) — MFS transporter Rv2209 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 prcA (family_assigned) — proteasome subunit alpha prcA pup (family_assigned) — ubiquitin-like protein Pup pup prcB (family_assigned) — proteasome subunit beta prcB mec (requalified) — CysO-cysteine peptidase mec bpa (requalified) — proteasome activator protein Bpa bpa glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 iniB (requalified) — isoniazid-induced protein IniB iniB PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 rplD (requalified) — 50S ribosomal protein L4 rplD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY rpsB (requalified) — 30S ribosomal protein S2 rpsB rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX rplW (requalified) — 50S ribosomal protein L23 rplW cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 espE (requalified) — type VII secretion system ESX-1 associated protein espE Rv2086 (family_assigned) — hypothetical protein Rv2086 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv2083 (dark) — hypothetical protein Rv2083 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2084 (dark) — hypothetical protein Rv2084

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.