MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1039c · 28 genes shown · anchor PE8 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE15 (family_assigned) — PPE family protein PPE15 PPE15 PE8 (family_assigned) — PE family protein PE8 PE8 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794 esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxI (requalified) — type VII secretion system ESX-5 protein EsxL esxI Rv2632c (family_assigned) — DUF1876 domain-containing protein Rv2632c Rv2633c (requalified) — non-heme di-iron catalase Rv2633c PPE43 (family_assigned) — PPE family protein PPE43 PPE43 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 PPE41 (family_assigned) — PPE family protein PPE41 PPE41 PE25 (family_assigned) — PE family protein PE25 PE25 esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL esxO (requalified) — type VII secretion system effector EsxO esxO esxN (requalified) — ESAT-6 like protein EsxN esxN esxK (requalified) — type VII secretion system ESX-5 protein EsxJ esxK esxP (requalified) — type VII secretion system ESX-5 protein EsxJ esxP esxW (requalified) — type VII secretion system protein EsxW esxW esxV (requalified) — ESAT-6 like protein EsxV esxV Rv2302 (family_assigned) — DUF1918 domain-containing protein Rv2302 Rv1366 (family_assigned) — GTP pyrophosphokinase family protein Rv1366 Rv3131 (requalified) — NAD(P)H nitroreductase Rv3131 Rv3134c (requalified) — universal stress protein Rv3134c dosT (requalified) — two-component system sensor histidine kinase DosT dosT Rv3896c (requalified) — transglycosylase Rv3896c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.