MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1028c · 34 genes shown · anchor kdpE · open gene page → · ← back to 1 hop

Evidence: Min score 0
kdpD (requalified) — sensor histidine kinase KdpD kdpD kdpE (requalified) — two-component system response regulator KdpE kdpE kdpC (family_assigned) — K(+)-transporting ATPase subunit C kdpC kdpB (family_assigned) — potassium-transporting ATPase subunit KdpB kdpB kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA trcR (requalified) — two-component system response regulator TrcR trcR pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT prrA (requalified) — two-component system response regulator PrrA prrA tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mprA (requalified) — two-component system response regulator MprA mprA Rv2884 (family_assigned) — transcriptional regulator Rv2884 mtrA (requalified) — two-component system response regulator MtrA mtrA tcrX (requalified) — two-component system response regulator TcrX tcrX trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c kdpF (requalified) — membrane protein KdpF kdpF arfB (family_assigned) — hypothetical protein arfB Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 tcrY (requalified) — two component sensor kinase TcrY tcrY prrB (requalified) — two-component system sensor histidine kinase PrrB prrB mprB (requalified) — two-component system sensor histidine kinase MprB mprB pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv0603 (family_assigned) — hypothetical protein Rv0603 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB phoR (requalified) — sensory box histidine kinase PhoR phoR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.