MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1027c · 44 genes shown · anchor kdpD · open gene page → · ← back to 1 hop

Evidence: Min score 0
kdpE (requalified) — two-component system response regulator KdpE kdpE kdpD (requalified) — sensor histidine kinase KdpD kdpD trcR (requalified) — two-component system response regulator TrcR trcR trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c prrB (requalified) — two-component system sensor histidine kinase PrrB prrB embR (requalified) — response regulator transcription factor EmbR embR cobB (requalified) — NAD-dependent protein deacylase cobB kdpB (family_assigned) — potassium-transporting ATPase subunit KdpB kdpB oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS kdpC (family_assigned) — K(+)-transporting ATPase subunit C kdpC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT tcrY (requalified) — two component sensor kinase TcrY tcrY mprB (requalified) — two-component system sensor histidine kinase MprB mprB tcrX (requalified) — two-component system response regulator TcrX tcrX prrA (requalified) — two-component system response regulator PrrA prrA regX3 (requalified) — two component sensory transduction protein RegX regX3 phoP (requalified) — two-component system response regulator PhoP phoP cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1931c (family_assigned) — transcriptional regulator Rv1931c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1359 (family_assigned) — transcriptional regulator Rv1359 kdpF (requalified) — membrane protein KdpF kdpF tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mtrA (requalified) — two-component system response regulator MtrA mtrA mprA (requalified) — two-component system response regulator MprA mprA Rv0894 (family_assigned) — hypothetical protein Rv0894 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R mftR (family_assigned) — mycofactocin system transcriptional regulator mftR nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadE (requalified) — NAD(+) synthase nadE Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 pncA (requalified) — pyrazinamidase PncA pncA nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c arfB (family_assigned) — hypothetical protein arfB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.