MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1026 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 Rv1025 (dark) — hypothetical protein Rv1025 Rv0496 (family_assigned) — hypothetical protein Rv0496 relA (family_assigned) — RelA/SpoT family protein relA Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 eno (requalified) — phosphopyruvate hydratase eno ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 lpqU (requalified) — lytic murein transglycosylase lpqU Rv1021 (requalified) — nucleoside triphosphate pyrophosphohydrolase Rv1021 aroB (requalified) — 3-dehydroquinate synthase aroB mfd (requalified) — transcription-repair coupling factor mfd polA (requalified) — DNA polymerase I polA Rv1571 (family_assigned) — 2'-5' RNA ligase family protein Rv1571 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv0497 (family_assigned) — hypothetical protein Rv0497 Rv0498 (requalified) — sugar phosphate isomerase/epimerase Rv0498 Rv0499 (family_assigned) — thioesterase family protein Rv0499 proC (requalified) — pyrroline-5-carboxylate reductase proC rpsF (requalified) — 30S ribosomal protein S6 rpsF rplU (requalified) — 50S ribosomal protein L21 rplU rplR (requalified) — 50S ribosomal protein L18 rplR rplB (requalified) — 50S ribosomal protein L2 rplB pykA (requalified) — pyruvate kinase pykA gmk (requalified) — guanylate kinase gmk ftsQ (requalified) — cell division protein FtsQ ftsQ pgk (requalified) — phosphoglycerate kinase pgk gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 pgi (requalified) — glucose-6-phosphate isomerase pgi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap fba (requalified) — class II fructose-bisphosphate aldolase fba ppk2 (requalified) — polyphosphate kinase ppk2 ppa (requalified) — inorganic diphosphatase ppa mutT1 (requalified) — NUDIX hydrolase mutT1 mshD (requalified) — mycothiol synthase mshD hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB guaB2 (requalified) — IMP dehydrogenase guaB2 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 aroK (requalified) — shikimate kinase AroK aroK aroD (requalified) — type II 3-dehydroquinate dehydratase aroD aroF (requalified) — chorismate synthase aroF aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA aroE (requalified) — shikimate dehydrogenase aroE aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.