MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1022 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqU (requalified) — lytic murein transglycosylase lpqU Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 Rv1025 (dark) — hypothetical protein Rv1025 Rv1021 (requalified) — nucleoside triphosphate pyrophosphohydrolase Rv1021 mfd (requalified) — transcription-repair coupling factor mfd eno (requalified) — phosphopyruvate hydratase eno Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv2698 (dark) — DUF3093 domain-containing protein Rv2698 ldtB (requalified) — L%2CD-transpeptidase LdtMt2 ldtB Rv0813c (family_assigned) — FABP family protein Rv0813c pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 ftsQ (requalified) — cell division protein FtsQ ftsQ Rv0496 (family_assigned) — hypothetical protein Rv0496 relA (family_assigned) — RelA/SpoT family protein relA ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB guaB2 (requalified) — IMP dehydrogenase guaB2 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ pykA (requalified) — pyruvate kinase pykA pgk (requalified) — phosphoglycerate kinase pgk gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 pgi (requalified) — glucose-6-phosphate isomerase pgi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap fba (requalified) — class II fructose-bisphosphate aldolase fba Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv2696c (dark) — DUF3710 domain-containing protein Rv2696c dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv2235 (family_assigned) — SURF1 family protein Rv2235 eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.