MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1020 · 46 genes shown · anchor mazG · open gene page → · ← back to 1 hop

Evidence: Min score 0
mfd (requalified) — transcription-repair coupling factor mfd rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA Rv1021 (requalified) — nucleoside triphosphate pyrophosphohydrolase Rv1021 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 pth (requalified) — aminoacyl-tRNA hydrolase pth prfB (requalified) — peptide chain release factor PrfB prfB mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ lpqU (requalified) — lytic murein transglycosylase lpqU Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC Rv1637c (family_assigned) — hypothetical protein Rv1637c Rv2191 (family_assigned) — hypothetical protein Rv2191 uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB guaB2 (requalified) — IMP dehydrogenase guaB2 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ ftsQ (requalified) — cell division protein FtsQ ftsQ eno (requalified) — phosphopyruvate hydratase eno Rv1025 (dark) — hypothetical protein Rv1025 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF lpqT (requalified) — lipoprotein LpqT lpqT atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rplU (requalified) — 50S ribosomal protein L21 rplU rpmA (requalified) — 50S ribosomal protein L27 rpmA rplL (requalified) — 50S ribosomal protein L7/L12 rplL rplP (requalified) — 50S ribosomal protein L16 rplP rplM (requalified) — 50S ribosomal protein L13 rplM rpsP (requalified) — 30S ribosomal protein S16 rpsP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.