MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1016c · 44 genes shown · anchor prsA · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqT (requalified) — lipoprotein LpqT lpqT prsA (requalified) — ribose-phosphate diphosphokinase prsA glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY pth (requalified) — aminoacyl-tRNA hydrolase pth Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 lpqL (family_assigned) — M28 family metallopeptidase lpqL lpqI (requalified) — lipoprotein LpqI lpqI fecB (family_assigned) — iron-siderophore ABC transporter substrate-binding fecB lppX (requalified) — LppX_LprAFG lipoprotein lppX lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB lprF (requalified) — lipoprotein LprF lprF lppR (family_assigned) — sensor domain-containing protein lppR bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c tkt (requalified) — transketolase tkt rbsK (requalified) — ribokinase RbsK rbsK purF (requalified) — amidophosphoribosyltransferase purF mrsA (requalified) — phosphoglucosamine mutase mrsA murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA pta (requalified) — phosphate acetyltransferase pta glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rplQ (requalified) — 50S ribosomal protein L17 rplQ rplD (requalified) — 50S ribosomal protein L4 rplD ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c lpqM (requalified) — neutral zinc metallopeptidase lpqM lipT (requalified) — carboxylesterase LipT lipT thiS (requalified) — sulfur carrier protein ThiS thiS otsB2 (requalified) — trehalose-phosphatase otsB2 Rv0236A (dark) — hypothetical protein Rv0236A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.