MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1014c · 46 genes shown · anchor rplY · open gene page → · ← back to 1 hop

Evidence: Min score 0
pth (requalified) — aminoacyl-tRNA hydrolase pth rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH prsA (requalified) — ribose-phosphate diphosphokinase prsA lepA (requalified) — translation elongation factor 4 lepA frr (requalified) — ribosome recycling factor frr rplM (requalified) — 50S ribosomal protein L13 rplM prfB (requalified) — peptide chain release factor PrfB prfB rplQ (requalified) — 50S ribosomal protein L17 rplQ rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rplD (requalified) — 50S ribosomal protein L4 rplD prfA (requalified) — peptide chain release factor 1 prfA Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA Rv1021 (requalified) — nucleoside triphosphate pyrophosphohydrolase Rv1021 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 lpqL (family_assigned) — M28 family metallopeptidase lpqL hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB Rv3626c (requalified) — zinc-dependent metalloprotease Rv3626c thiS (requalified) — sulfur carrier protein ThiS thiS ppa (requalified) — inorganic diphosphatase ppa atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c tkt (requalified) — transketolase tkt rbsK (requalified) — ribokinase RbsK rbsK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.