MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1010 · 46 genes shown · anchor rpfB · open gene page → · ← back to 1 hop

Evidence: Min score 0
ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA rpfB (requalified) — resuscitation-promoting factor RpfB rpfB ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsH (requalified) — 30S ribosomal protein S8 rpsH tatD (requalified) — deoxyribonuclease TatD tatD fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB metS (requalified) — methionine--tRNA ligase metS Rv3268 (family_assigned) — hypothetical protein Rv3268 ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 rpsM (requalified) — 30S ribosomal protein S13 rpsM rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 rpsL (requalified) — 30S ribosomal protein S12 rpsL rplT (requalified) — 50S ribosomal protein L20 rplT rplV (requalified) — 50S ribosomal protein L22 rplV rpsR2 (requalified) — 30S ribosomal protein S18 rpsR2 rpsF (requalified) — 30S ribosomal protein S6 rpsF rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmE (requalified) — 50S ribosomal protein L31 rpmE rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.