MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1008 · 46 genes shown · anchor metS · open gene page → · ← back to 1 hop

Evidence: Min score 0
tatD (requalified) — deoxyribonuclease TatD tatD metS (requalified) — methionine--tRNA ligase metS ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA rpfB (requalified) — resuscitation-promoting factor RpfB rpfB lepA (requalified) — translation elongation factor 4 lepA ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE Rv2478c (family_assigned) — hypothetical protein Rv2478c ssb (family_assigned) — single-stranded DNA-binding protein ssb serS (requalified) — serine--tRNA ligase serS gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp ychF (requalified) — redox-regulated ATPase YchF ychF rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH rnc (requalified) — ribonuclease III rnc gltS (requalified) — glutamate--tRNA ligase gltS leuS (requalified) — leucine--tRNA ligase leuS argS (requalified) — arginine--tRNA ligase argS ileS (requalified) — isoleucine--tRNA ligase ileS metH (requalified) — methionine synthase metH rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB Rv3268 (family_assigned) — hypothetical protein Rv3268 rplS (requalified) — 50S ribosomal protein L19 rplS rplM (requalified) — 50S ribosomal protein L13 rplM rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsP (requalified) — 30S ribosomal protein S16 rpsP rplQ (requalified) — 50S ribosomal protein L17 rplQ rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 dnaE2 (requalified) — error-prone DNA polymerase dnaE2 Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c ettA (requalified) — energy-dependent translational throttle protein Et ettA priA (family_assigned) — primosomal protein N' priA rplI (requalified) — 50S ribosomal protein L9 rplI rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 dnaB (requalified) — replicative DNA helicase dnaB cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv3835 (family_assigned) — septum formation family protein Rv3835

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.