MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1006 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1006 (family_assigned) — hypothetical protein Rv1006 hsr1 (requalified) — hypothetical protein hsr1 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 Rv2114 (dark) — hypothetical protein Rv2114 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1005c (requalified) — para-aminobenzoate synthase component I Rv1005c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 trpE (requalified) — anthranilate synthase component I trpE mbtI (requalified) — salicylate synthase mbtI xerC (requalified) — tyrosine recombinase XerC xerC rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 pks12 (requalified) — type I polyketide synthase pks12 Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv2113 (family_assigned) — integral membrane protein Rv2113 Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE Rv2599 (family_assigned) — DUF4247 domain-containing protein Rv2599 Rv0181c (family_assigned) — pirin family protein Rv0181c Rv3434c (family_assigned) — rhomboid-like protein Rv3434c eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 Rv3900c (family_assigned) — hypothetical protein Rv3900c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 trpG (requalified) — anthranilate synthase component II trpG trpD (requalified) — anthranilate phosphoribosyltransferase trpD trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.