MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0990c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0990c (family_assigned) — SAF domain-containing protein Rv0990c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv3657c (family_assigned) — membrane protein Rv3657c Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c ssd (requalified) — septum site-determining protein Ssd ssd Rv3655c (requalified) — apoptosis inhibitor Rv3655c Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c Rv3753c (family_assigned) — hypothetical protein Rv3753c Rv3013 (family_assigned) — amino acid-binding protein Rv3013 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv3659c (requalified) — conjugal transfer protein Rv3659c Rv3656c (dark) — DUF4244 domain-containing protein Rv3656c Rv3654c (family_assigned) — hypothetical protein Rv3654c Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 rimJ (requalified) — ribosomal-protein-alanine acetyltransferase RimJ rimJ Rv3752c (requalified) — nucleoside deaminase Rv3752c tyrA (requalified) — prephenate dehydrogenase TyrA tyrA Rv3311 (family_assigned) — primosomal protein Rv3311 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c rpsD (requalified) — 30S ribosomal protein S4 rpsD rplB (requalified) — 50S ribosomal protein L2 rplB rpmE (requalified) — 50S ribosomal protein L31 rpmE rpsO (requalified) — 30S ribosomal protein S15 rpsO rplO (requalified) — 50S ribosomal protein L15 rplO rpsE (requalified) — 30S ribosomal protein S5 rpsE moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c idsB (family_assigned) — polyprenyl synthetase family protein idsB idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 phyA (requalified) — presqualene diphosphate synthase HpnD phyA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.