MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0980c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS18 (family_assigned) — PE-PGRS family protein PE_PGRS18 PE_PGRS18 Rv1057 (family_assigned) — YncE family protein Rv1057 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB qcrC (requalified) — cytochrome c qcrC Rv1157c (dark) — hypothetical protein Rv1157c Rv0318c (family_assigned) — integral membrane protein Rv0318c PPE24 (family_assigned) — PPE family protein PPE24 PPE24 Rv3403c (family_assigned) — FAD/NAD(P)-binding protein Rv3403c PPE56 (family_assigned) — PPE family protein PPE56 PPE56 pks13 (requalified) — polyketide synthase Pks13 pks13 mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 fadD14 (requalified) — long-chain fatty acid--CoA ligase fadD14 PE_PGRS17 (family_assigned) — PE-PGRS family protein PE_PGRS17 PE_PGRS17 Rv1061 (requalified) — class II glutamine amidotransferase Rv1061 Rv1062 (family_assigned) — patatin-like phospholipase family protein Rv1062 mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH mbtE (requalified) — peptide synthetase mbtE mbtC (requalified) — polyketide synthetase MbtC mbtC pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaE (family_assigned) — heme-copper oxidase subunit III ctaE Rv1158c (dark) — hypothetical protein Rv1158c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG ftsW (family_assigned) — putative lipid II flippase FtsW ftsW dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ pcp (requalified) — pyroglutamyl-peptidase I pcp Rv1749c (family_assigned) — DUF6790 family protein Rv1749c irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA PPE8 (family_assigned) — PPE family protein PPE8 PPE8 sodA (requalified) — superoxide dismutase sodA Rv2293c (family_assigned) — hypothetical protein Rv2293c cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c Rv2209 (requalified) — MFS transporter Rv2209

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.