MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0978c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS17 (family_assigned) — PE-PGRS family protein PE_PGRS17 PE_PGRS17 Rv1057 (family_assigned) — YncE family protein Rv1057 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB qcrC (requalified) — cytochrome c qcrC Rv1157c (dark) — hypothetical protein Rv1157c Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv2209 (requalified) — MFS transporter Rv2209 pks13 (requalified) — polyketide synthase Pks13 pks13 mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 iniB (requalified) — isoniazid-induced protein IniB iniB fadD14 (requalified) — long-chain fatty acid--CoA ligase fadD14 PE_PGRS18 (family_assigned) — PE-PGRS family protein PE_PGRS18 PE_PGRS18 Rv1061 (requalified) — class II glutamine amidotransferase Rv1061 Rv1062 (family_assigned) — patatin-like phospholipase family protein Rv1062 mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH mbtE (requalified) — peptide synthetase mbtE mbtC (requalified) — polyketide synthetase MbtC mbtC pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaE (family_assigned) — heme-copper oxidase subunit III ctaE Rv1158c (dark) — hypothetical protein Rv1158c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv0329c (requalified) — class I SAM-dependent methyltransferase Rv0329c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 fas (requalified) — fatty acid synthase fas nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp fadD32 (requalified) — long-chain-fatty-acid--AMP ligase FadD32 fadD32 accD4 (family_assigned) — acyl-CoA carboxylase subunit beta accD4 mbtI (requalified) — salicylate synthase mbtI entC (requalified) — isochorismate synthase entC mbtJ (requalified) — acetyl hydrolase mbtJ cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.