MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0963c · 45 genes shown · anchor lprP · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0963c (family_assigned) — hypothetical protein Rv0963c Rv0964c (family_assigned) — hypothetical protein Rv0964c lprP (family_assigned) — LppA family lipoprotein lprP Rv0965c (family_assigned) — hypothetical protein Rv0965c PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK lppX (requalified) — LppX_LprAFG lipoprotein lppX PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv0966c (dark) — DUF1707 domain-containing protein Rv0966c Rv3294c (family_assigned) — hypothetical protein Rv3294c echA7 (family_assigned) — enoyl-CoA hydratase family protein echA7 accD2 (family_assigned) — acyl-CoA carboxylase subunit beta accD2 pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 moaB2 (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis moaB2 csoR (requalified) — copper-sensing transcriptional repressor CsoR csoR Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 iniB (requalified) — isoniazid-induced protein IniB iniB PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv2306A (family_assigned) — Possible conserved membrane protein Rv2306A Rv2306B (family_assigned) — Possible conserved membrane protein Rv2306B Rv2160A (family_assigned) — Conserved hypothetical protein Rv2160A Rv2160c (family_assigned) — Conserved hypothetical protein Rv2160c Rv2161c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv2161c murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE ftsQ (requalified) — cell division protein FtsQ ftsQ murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX PPE8 (family_assigned) — PPE family protein PPE8 PPE8 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2209 (requalified) — MFS transporter Rv2209 espB (requalified) — type VII secretion system ESX-1 target EspB espB eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 pks1 (requalified) — polyketide synthase pks1 mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 PPE13 (family_assigned) — PPE family protein PPE13 PPE13 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 PPE10 (family_assigned) — PPE family protein PPE10 PPE10 espE (requalified) — type VII secretion system ESX-1 associated protein espE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.