MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0955 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0954 (requalified) — DUF5336 domain-containing protein Rv0954 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG purN (requalified) — phosphoribosylglycinamide formyltransferase purN purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH pimE (requalified) — mannosyltransferase pimE rsmA (requalified) — anti-sigma-M factor RsmA rsmA aftD (family_assigned) — DUF3367 domain-containing protein aftD PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 Rv0953c (requalified) — LLM class F420-dependent oxidoreductase Rv0953c rpsI (requalified) — 30S ribosomal protein S9 rpsI fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH mbtF (requalified) — peptide synthetase mbtF mbtE (requalified) — peptide synthetase mbtE mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtD (requalified) — mycobactin polyketide synthase MbtD mbtD mbtC (requalified) — polyketide synthetase MbtC mbtC purD (requalified) — phosphoribosylamine--glycine ligase purD purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv0787A (family_assigned) — hypothetical protein Rv0787A purB (requalified) — adenylosuccinate lyase purB glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT purA (requalified) — adenylosuccinate synthase purA Rv1158c (dark) — hypothetical protein Rv1158c Rv1157c (dark) — hypothetical protein Rv1157c sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM Rv3909 (dark) — hypothetical protein Rv3909 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 trxC (requalified) — thioredoxin trxC trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c mmpA (requalified) — hypothetical protein mmpA Rv0227c (family_assigned) — membrane protein Rv0227c cobQ1 (requalified) — cobyric acid synthase cobQ1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.