MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0954 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0954 (requalified) — DUF5336 domain-containing protein Rv0954 Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0953c (requalified) — LLM class F420-dependent oxidoreductase Rv0953c rpsI (requalified) — 30S ribosomal protein S9 rpsI purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB purN (requalified) — phosphoribosylglycinamide formyltransferase purN Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 Rv0958 (family_assigned) — ATP-binding protein Rv0958 sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC lprB (family_assigned) — DUF3558 domain-containing protein lprB mihF (requalified) — integration host factor MihF mihF pra (family_assigned) — RDD family protein pra Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG pimE (requalified) — mannosyltransferase pimE Rv2893 (requalified) — LLM class F420-dependent oxidoreductase Rv2893 Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c Rv3531c (family_assigned) — hypothetical protein Rv3531c fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM purB (requalified) — adenylosuccinate lyase purB glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT purA (requalified) — adenylosuccinate synthase purA fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE20 (family_assigned) — acyl-CoA dehydrogenase family protein fadE20 purD (requalified) — phosphoribosylamine--glycine ligase purD purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv0787A (family_assigned) — hypothetical protein Rv0787A vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c hemZ (requalified) — ferrochelatase hemZ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.