MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0952 · 33 genes shown · anchor sucC · open gene page → · ← back to 1 hop

Evidence: Min score 0
sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA Rv0249c (family_assigned) — succinate dehydrogenase membrane anchor subunit Rv0249c fum (requalified) — class II fumarate hydratase fum bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB aceE (requalified) — pyruvate dehydrogenase E1 component aceE bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA frdD (family_assigned) — fumarate reductase subunit FrdD frdD frdC (family_assigned) — fumarate reductase subunit C frdC Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 aroF (requalified) — chorismate synthase aroF pta (requalified) — phosphate acetyltransferase pta Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.