MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0949 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 adnA (requalified) — ATP-dependent DNA helicase AdnA adnA mku (requalified) — Ku protein mku uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB Rv0948c (requalified) — chorismate mutase Rv0948c recA (requalified) — intein-containing recombinase RecA recA recR (requalified) — recombination mediator RecR recR uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA dnaN (family_assigned) — DNA polymerase III subunit beta dnaN ligA (requalified) — NAD-dependent DNA ligase LigA ligA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB Rv3200c (family_assigned) — potassium channel family protein Rv3200c nudC (requalified) — NAD(+) diphosphatase nudC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv2191 (family_assigned) — hypothetical protein Rv2191 radA (requalified) — DNA repair protein RadA radA ligD (requalified) — ATP-dependent DNA ligase ligD ligD (requalified) — non-homologous end-joining DNA ligase ligD Rv0269c (requalified) — DNA polymerase domain-containing protein Rv0269c ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC Rv1634 (requalified) — MFS transporter Rv1634 aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG aroF (requalified) — chorismate synthase aroF tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE Rv1885c (requalified) — chorismate mutase Rv1885c recX (requalified) — recombination regulator RecX recX polA (requalified) — DNA polymerase I polA lexA (requalified) — transcriptional repressor LexA lexA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c recO (requalified) — DNA repair protein RecO recO Rv3717 (family_assigned) — hypothetical protein Rv3717 espL (requalified) — type VII secretion system ESX-1 associated protein espL Rv3714c (family_assigned) — hypothetical protein Rv3714c mfd (requalified) — transcription-repair coupling factor mfd Rv1637c (family_assigned) — hypothetical protein Rv1637c dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.