MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0903c · 42 genes shown · anchor prrB · open gene page → · ← back to 1 hop

Evidence: Min score 0
prrA (requalified) — two-component system response regulator PrrA prrA prrB (requalified) — two-component system sensor histidine kinase PrrB prrB Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c mprB (requalified) — two-component system sensor histidine kinase MprB mprB trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS tcrY (requalified) — two component sensor kinase TcrY tcrY senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 phoR (requalified) — sensory box histidine kinase PhoR phoR mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 pafB (family_assigned) — YafY family protein pafB Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 Rv1100 (family_assigned) — hypothetical protein Rv1100 trcR (requalified) — two-component system response regulator TrcR trcR phoP (requalified) — two-component system response regulator PhoP phoP tcrX (requalified) — two-component system response regulator TcrX tcrX mprA (requalified) — two-component system response regulator MprA mprA regX3 (requalified) — two component sensory transduction protein RegX regX3 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mtrA (requalified) — two-component system response regulator MtrA mtrA pepD (requalified) — serine protease PepD pepD kdpE (requalified) — two-component system response regulator KdpE kdpE lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c pafC (family_assigned) — YafY family protein pafC pafA (requalified) — Pup--protein ligase pafA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv2732c (family_assigned) — hypothetical protein Rv2732c fum (requalified) — class II fumarate hydratase fum Rv1610 (family_assigned) — TIGR02234 family membrane protein Rv1610

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.