MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0902c · 43 genes shown · anchor prrA · open gene page → · ← back to 1 hop

Evidence: Min score 0
prrB (requalified) — two-component system sensor histidine kinase PrrB prrB prrA (requalified) — two-component system response regulator PrrA prrA trcR (requalified) — two-component system response regulator TrcR trcR phoP (requalified) — two-component system response regulator PhoP phoP tcrX (requalified) — two-component system response regulator TcrX tcrX mprA (requalified) — two-component system response regulator MprA mprA regX3 (requalified) — two component sensory transduction protein RegX regX3 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mtrA (requalified) — two-component system response regulator MtrA mtrA kdpE (requalified) — two-component system response regulator KdpE kdpE pafB (family_assigned) — YafY family protein pafB Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c mprB (requalified) — two-component system sensor histidine kinase MprB mprB trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS tcrY (requalified) — two component sensor kinase TcrY tcrY senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 phoR (requalified) — sensory box histidine kinase PhoR phoR Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv0603 (family_assigned) — hypothetical protein Rv0603 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB kdpD (requalified) — sensor histidine kinase KdpD kdpD Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA pafC (family_assigned) — YafY family protein pafC pafA (requalified) — Pup--protein ligase pafA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA Rv0876c (requalified) — MFS transporter Rv0876c Rv0877 (dark) — DUF3027 domain-containing protein Rv0877 Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv3779 (family_assigned) — DUF6541 family protein Rv3779 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.