MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0901 · 46 genes shown · anchor arfA · open gene page → · ← back to 1 hop

Evidence: Min score 0
arfC (family_assigned) — hypothetical protein arfC arfA (family_assigned) — peptidoglycan-binding protein ArfA arfA arfB (family_assigned) — hypothetical protein arfB espK (family_assigned) — ESX-1 secretion-associated protein EspK espK PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv0898c (family_assigned) — DUF2630 family protein Rv0898c PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 iniB (requalified) — isoniazid-induced protein IniB iniB Rv3737 (family_assigned) — threonine/serine exporter family protein Rv3737 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 Rv1226c (family_assigned) — PH domain-containing protein Rv1226c Rv0897c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0897c rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv1157c (dark) — hypothetical protein Rv1157c kdpE (requalified) — two-component system response regulator KdpE kdpE kdpC (family_assigned) — K(+)-transporting ATPase subunit C kdpC espB (requalified) — type VII secretion system ESX-1 target EspB espB PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2209 (requalified) — MFS transporter Rv2209 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv1265 (family_assigned) — hypothetical protein Rv1265 rsfB (family_assigned) — STAS domain-containing protein rsfB PPE34 (family_assigned) — PPE family protein PPE34 PPE34 Rv3899c (family_assigned) — hypothetical protein Rv3899c mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 espI (family_assigned) — MinD/ParA family protein espI esxA (requalified) — ESAT-6 protein EsxA esxA eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3735 (requalified) — adenosine-specific kinase Rv3735 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB Rv1227c (family_assigned) — PH domain-containing protein Rv1227c Rv1225c (family_assigned) — HAD-IIA family hydrolase Rv1225c Rv3365c (requalified) — sensor histidine kinase Rv3365c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.