MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0900 · 25 genes shown · anchor arfC · open gene page → · ← back to 1 hop

Evidence: Min score 0
arfB (family_assigned) — hypothetical protein arfB arfC (family_assigned) — hypothetical protein arfC arfA (family_assigned) — peptidoglycan-binding protein ArfA arfA Rv0898c (family_assigned) — DUF2630 family protein Rv0898c Rv0897c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0897c kdpE (requalified) — two-component system response regulator KdpE kdpE kdpC (family_assigned) — K(+)-transporting ATPase subunit C kdpC kdpF (requalified) — membrane protein KdpF kdpF espK (family_assigned) — ESX-1 secretion-associated protein EspK espK PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv1157c (dark) — hypothetical protein Rv1157c Rv1265 (family_assigned) — hypothetical protein Rv1265 rsfB (family_assigned) — STAS domain-containing protein rsfB phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c kdpD (requalified) — sensor histidine kinase KdpD kdpD trcR (requalified) — two-component system response regulator TrcR trcR trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c kdpB (family_assigned) — potassium-transporting ATPase subunit KdpB kdpB lprJ (requalified) — lipoprotein LprJ lprJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.