MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0899 · 44 genes shown · anchor arfC · open gene page → · ← back to 1 hop

Evidence: Min score 0
arfA (family_assigned) — peptidoglycan-binding protein ArfA arfA arfC (family_assigned) — hypothetical protein arfC Rv0898c (family_assigned) — DUF2630 family protein Rv0898c arfB (family_assigned) — hypothetical protein arfB Rv0897c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0897c rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv1157c (dark) — hypothetical protein Rv1157c rplI (requalified) — 50S ribosomal protein L9 rplI iniB (requalified) — isoniazid-induced protein IniB iniB rplM (requalified) — 50S ribosomal protein L13 rplM Rv1288 (requalified) — esterase Rv1288 rpmF (requalified) — 50S ribosomal protein L32 rpmF espK (family_assigned) — ESX-1 secretion-associated protein EspK espK PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv1265 (family_assigned) — hypothetical protein Rv1265 rsfB (family_assigned) — STAS domain-containing protein rsfB kdpE (requalified) — two-component system response regulator KdpE kdpE kdpC (family_assigned) — K(+)-transporting ATPase subunit C kdpC phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 Rv1158c (dark) — hypothetical protein Rv1158c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG ftsW (family_assigned) — putative lipid II flippase FtsW ftsW rplB (requalified) — 50S ribosomal protein L2 rplB rpsH (requalified) — 30S ribosomal protein S8 rpsH rplP (requalified) — 50S ribosomal protein L16 rplP iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv2209 (requalified) — MFS transporter Rv2209 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rpmE (requalified) — 50S ribosomal protein L31 rpmE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.