MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0890c · 46 genes shown · anchor embR · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0890c (family_assigned) — HTH-type transcriptional regulator Rv0890c Rv0891c (family_assigned) — hypothetical protein Rv0891c embR (requalified) — response regulator transcription factor EmbR embR Rv1359 (family_assigned) — transcriptional regulator Rv1359 citA (requalified) — citrate synthase 2 citA Rv0845 (requalified) — sensor histidine kinase NarS Rv0845 devS (requalified) — two-component system sensor histidine kinase DevS devS dosT (requalified) — two-component system sensor histidine kinase DosT dosT moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3365c (requalified) — sensor histidine kinase Rv3365c PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv1120c (family_assigned) — hypothetical protein Rv1120c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3840 (family_assigned) — transcriptional regulator Rv3840 acn (requalified) — iron-regulated aconitate hydratase Acn acn mdh (requalified) — malate dehydrogenase mdh acs (requalified) — acetate--CoA ligase acs gltA2 (requalified) — citrate synthase gltA2 bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC glcB (requalified) — malate synthase G glcB narL (requalified) — two-component system response regulator NarL narL devR (requalified) — two-component system response regulator DevR devR Rv0195 (requalified) — response regulator transcription factor Rv0195 Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv3134c (requalified) — universal stress protein Rv3134c Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv2005c (requalified) — universal stress protein Rv2005c narX (family_assigned) — respiratory nitrate reductase subunit gamma narX Rv2624c (requalified) — universal stress protein Rv2624c Rv2026c (requalified) — universal stress protein Rv2026c acg (family_assigned) — FMN-binding protein Acg acg Rv2028c (requalified) — universal stress protein Rv2028c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.