MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0889c · 40 genes shown · anchor gltA2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
citA (requalified) — citrate synthase 2 citA acn (requalified) — iron-regulated aconitate hydratase Acn acn mdh (requalified) — malate dehydrogenase mdh acs (requalified) — acetate--CoA ligase acs gltA2 (requalified) — citrate synthase gltA2 bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC glcB (requalified) — malate synthase G glcB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c mqo (requalified) — malate dehydrogenase (quinone) mqo prpC (requalified) — 2-methylcitrate synthase prpC pca (requalified) — pyruvate carboxylase pca Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 icl1 (requalified) — isocitrate lyase icl1 fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC aceE (requalified) — pyruvate dehydrogenase E1 component aceE Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 aceAa (requalified) — isocitrate lyase AceAa aceAa aceAb (requalified) — isocitrate lyase AceAb aceAb pta (requalified) — phosphate acetyltransferase pta Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA prpD (requalified) — 2-methylcitrate dehydratase prpD pykA (requalified) — pyruvate kinase pykA aroF (requalified) — chorismate synthase aroF sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC mobA (requalified) — molybdenum cofactor guanylyltransferase mobA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.