MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0881 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0881 (requalified) — RNA methyltransferase Rv0881 Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 rsfS (requalified) — ribosome silencing factor rsfS Rv0879c (family_assigned) — DUF2530 domain-containing protein Rv0879c rplQ (requalified) — 50S ribosomal protein L17 rplQ rplU (requalified) — 50S ribosomal protein L21 rplU rplO (requalified) — 50S ribosomal protein L15 rplO rplK (requalified) — 50S ribosomal protein L11 rplK rplM (requalified) — 50S ribosomal protein L13 rplM rplX (requalified) — 50S ribosomal protein L24 rplX rplC (requalified) — 50S ribosomal protein L3 rplC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT lpqM (requalified) — neutral zinc metallopeptidase lpqM Rv2049c (family_assigned) — hypothetical protein Rv2049c Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv2175c (family_assigned) — DNA-binding protein Rv2175c Rv0744c (family_assigned) — helix-turn-helix domain-containing protein Rv0744c Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c rplN (requalified) — 50S ribosomal protein L14 rplN nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD rplS (requalified) — 50S ribosomal protein L19 rplS rpmA (requalified) — 50S ribosomal protein L27 rpmA PPE13 (family_assigned) — PPE family protein PPE13 PPE13 rplV (requalified) — 50S ribosomal protein L22 rplV rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpmF (requalified) — 50S ribosomal protein L32 rpmF rpsI (requalified) — 30S ribosomal protein S9 rpsI rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmE (requalified) — 50S ribosomal protein L31 rpmE rplR (requalified) — 50S ribosomal protein L18 rplR rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0500B (family_assigned) — Conserved hypothetical protein Rv0500B rplA (requalified) — 50S ribosomal protein L1 rplA rplD (requalified) — 50S ribosomal protein L4 rplD rplF (requalified) — 50S ribosomal protein L6 rplF pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.