MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0867c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
rpfA (requalified) — resuscitation-promoting factor protein RpfA rpfA Rv1954A (dark) — Hypothetical protein Rv1954A Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv0316 (family_assigned) — muconolactone Delta-isomerase family protein Rv0316 Rv3737 (family_assigned) — threonine/serine exporter family protein Rv3737 Rv1230c (family_assigned) — lytic transglycosylase domain-containing protein Rv1230c espK (family_assigned) — ESX-1 secretion-associated protein EspK espK Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 Rv0925c (family_assigned) — flavodoxin family protein Rv0925c Rv2771c (family_assigned) — flavodoxin family protein Rv2771c otsB2 (requalified) — trehalose-phosphatase otsB2 otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 rpfE (requalified) — resuscitation-promoting factor protein RpfE rpfE rpfC (requalified) — resuscitation-promoting factor RpfC rpfC rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD Rv1861 (family_assigned) — GlsB/YeaQ/YmgE family stress response membrane pro Rv1861 higB (requalified) — type II toxin-antitoxin system toxin HigB higB gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB Rv3909 (dark) — hypothetical protein Rv3909 Rv2164c (family_assigned) — hypothetical protein Rv2164c ptrp (family_assigned) — hypothetical protein ptrp Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv2209 (requalified) — MFS transporter Rv2209 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv0314c (family_assigned) — membrane protein Rv0314c Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv3735 (requalified) — adenosine-specific kinase Rv3735 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB mrp (family_assigned) — Mrp/NBP35 family ATP-binding protein mrp Rv1231c (family_assigned) — DUF1003 domain-containing protein Rv1231c Rv1232c (requalified) — magnesium transporter Rv1232c Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 Rv3365c (requalified) — sensor histidine kinase Rv3365c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.