MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0860 · 41 genes shown · anchor fadA · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadB (requalified) — fatty oxidation protein FadB fadB fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 ltp1 (requalified) — lipid-transfer protein ltp1 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c Rv1627c (requalified) — lipid-transfer protein Rv1627c Rv1135A (family_assigned) — Possible acetyl-CoA acetyltransferase (acetoacetyl Rv1135A fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 acs (requalified) — acetate--CoA ligase acs glcB (requalified) — malate synthase G glcB htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 leuA (requalified) — 2-isopropylmalate synthase leuA scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB Rv3521 (family_assigned) — hypothetical protein Rv3521 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 Rv0913c (family_assigned) — carotenoid oxygenase family protein Rv0913c Rv1628c (family_assigned) — Zn-ribbon domain-containing OB-fold protein Rv1628c echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 echA15 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA15 echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 echA10 (requalified) — enoyl-CoA hydratase echA10 Rv1136 (family_assigned) — Possible enoyl-CoA hydratase Rv1136 celA2a (family_assigned) — Probable cellulase CelA2a (endo-1,4-beta-glucanase celA2a tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.