MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0855 · 46 genes shown · anchor pdc · open gene page → · ← back to 1 hop

Evidence: Min score 0
far (requalified) — fatty-acid-CoA racemase far mcr (requalified) — alpha-methylacyl-CoA racemase mcr Rv0854 (family_assigned) — SRPBCC family protein Rv0854 Rv0856 (family_assigned) — hypothetical protein Rv0856 Rv0857 (family_assigned) — hypothetical protein Rv0857 pdc (requalified) — alpha-keto-acid decarboxylase pdc htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY hadB (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadB hadB fadE17 (requalified) — acyl-CoA dehydrogenase fadE17 pepA (family_assigned) — S1C family serine protease pepA oxcA (requalified) — oxalyl-CoA decarboxylase oxcA marP (requalified) — acid resistance serine protease MarP marP fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 Rv1144 (requalified) — 3-hydroxyacyl-CoA dehydrogenase Rv1144 echA10 (requalified) — enoyl-CoA hydratase echA10 fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 fadD19 (requalified) — acyl-CoA synthetase fadD19 Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv3197 (family_assigned) — AarF/ABC1/UbiB kinase family protein Rv3197 Rv3679 (family_assigned) — ArsA family ATPase Rv3679 Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 Rv0502 (family_assigned) — lysophospholipid acyltransferase family protein Rv0502 lppL (family_assigned) — hypothetical protein lppL Rv2712c (dark) — DUF4192 domain-containing protein Rv2712c adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA fba (requalified) — class II fructose-bisphosphate aldolase fba Rv2683 (family_assigned) — hypothetical protein Rv2683 Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 hadA (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadA hadA hadC (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadC hadC Rv0504c (family_assigned) — MaoC family dehydratase N-terminal domain-containi Rv0504c adk (requalified) — adenylate kinase adk rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplF (requalified) — 50S ribosomal protein L6 rplF echA13 (requalified) — enoyl-CoA hydratase echA13 fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 mce3A (family_assigned) — Mce family protein Mce3A mce3A yrbE3B (family_assigned) — ABC transporter permease yrbE3B fadB (requalified) — fatty oxidation protein FadB fadB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.