MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0849 · 45 genes shown · anchor cysK2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0849 (requalified) — MFS transporter Rv0849 cysK2 (requalified) — cysteine synthase CysK cysK2 mmcO (requalified) — multicopper oxidase MmcO mmcO lpqS (requalified) — lipoprotein LpqS lpqS Rv2963 (requalified) — permease Rv2963 Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv2686c (family_assigned) — fluoroquinolones efflux ABC transporter permease Rv2686c Rv1733c (family_assigned) — hypothetical protein Rv1733c rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv0106 (family_assigned) — GTP-binding protein Rv0106 arsC (family_assigned) — ACR3 family arsenite efflux transporter arsC Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 serC (requalified) — phosphoserine transaminase serC hemZ (requalified) — ferrochelatase hemZ bfrA (requalified) — bacterioferritin BfrA bfrA bfrB (requalified) — ferritin BfrB bfrB Rv0190 (family_assigned) — metal-sensitive transcriptional regulator Rv0190 purU (requalified) — formyltetrahydrofolate deformylase purU Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv2688c (family_assigned) — ABC transporter ATP-binding protein Rv2688c Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0955 (family_assigned) — DUF6350 family protein Rv0955 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv3134c (requalified) — universal stress protein Rv3134c acg (family_assigned) — FMN-binding protein Acg acg Rv2627c (family_assigned) — alpha/beta hydrolase Rv2627c hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c narK2 (requalified) — nitrate transporter NarK narK2 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM Rv3909 (dark) — hypothetical protein Rv3909 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 trxC (requalified) — thioredoxin trxC trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 rpmB2 (requalified) — 50S ribosomal protein L28 rpmB2 rpmG1 (requalified) — 50S ribosomal protein L33 rpmG1 Rv2059 (family_assigned) — hypothetical protein Rv2059 PPE3 (family_assigned) — PPE family protein PPE3 PPE3 Rv2990c (requalified) — class I SAM-dependent methyltransferase Rv2990c Rv2642 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2642

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.